Top 3 FLAC CUE Splitter to Separate into Individual Audio Tracks

When you download the FLAC albums in the Internet or get FLAC files from the ripped CDs, you will find there are a large FLAC file along with a CUE file after decoding. However, you could not play the FLAC file directly. For using FLAC files, you need to split it into multiple tracks and extract the FLAC tracks for direct playback with the FLAC player.

That's what we shall introduce in the following description, how to split FLAC CUE file into individual tracks with the 3 powerful FLAC CUE splitter.

Part 1. What is FLAC CUE File

What is FLAC CUE file ?

FLAC is the well known lossless audio codec, which lets you backup CDs with quality loss. When you rip CD to FLAC or download a FLAC album online, you will get a large single FLAC image file, which includes FLAC tracks, and CUE file that contains the markers and tracklist.

However, the CUE file may get you into trouble like the friend saying:

"I recently received a flac-formatted audio music file. It came along with a separate flac.cue file and a .cue file. I'm not certain what the .cue file is, but the flac.cue file lists all the tracking cues for the main flac file. With some converting tools I can convert the FLAC to any other format with no problem, but I need to split it up into individual tracks and can't seem to find a way to do this. If I burn only the .flac file, then I'll end up with a 60 minute CD with no tracking cues. Is there any way to incorporate the flac.cue file into the CD so that I can see the tracks listed when I insert the CD into a player?"

Wow, a long story about FLAC CUE file.

Of course, there is a great way to solve the problem.

The CUE file is the index file associated with FLAC file, if there is no CUE file, it can't select the song when playing FLAC file. Open the CUE file with Notepad program, you will find that it records the singers of entire album in FLAC files, album name, FLAC file name, track number, each track title, artist, start time and end time. Thus it is so important for you when you want to burn CD with the FLAC file.

For fixing it, you need the powerful FLAC CUE Splitter software, which splits one big album .flac file which contains multiple tracks up into individual tracks via .cue file and then save as each individual song/music.

That's what we shall show you in the next part.

Why Should You Split FLAC Files with CUE

If you have downloaded a high-fidelity album, you might find it consists of one massive .flac file and a small .cue file. While this keeps the album's integrity, it brings several inconveniences. Here is why you need a professional FLAC CUE splitter:

• • Individual track navigation: Without splitting, you cannot skip to a specific song. A single FLAC file forces you to fast-forward manually to find your favorite track.
• • Better mobile compatibility: Many mobile music players and car stereos do not support CUE sheets. Splitting the file ensures every song is recognized as an individual track on iPhone, Android, or MP3 players.
• • Manageable music library: Smaller, individual tracks are easier to rename, tag (ID3 tags), and organize in media libraries like iTunes, Windows Media Player, or Plex.
• • Save storage space: If you only like a few songs from an entire album, splitting allows you to keep the tracks you love and delete the rest, saving valuable disk space.
• • Lossless quality preservation: Using a dedicated splitter ensures that the cutting process is "lossless," meaning the audio quality remains identical to the original studio master.

Part 2. How to Separate FLAC CUE to MP3 FLAC WAV

The easiest and most professional way to split FLAC CUE files is with AnyMP4 Video Converter Ultimate. As the industry-leading FLAC CUE splitter and converter for Windows and Mac, it goes far beyond simple cutting.

Unlike legacy tools such as Medieval CUE Splitter, the 2026 version of AnyMP4 integrates AI-Powered Audio Enhancements. This allows you to not only extract individual tracks but also use AI Noise Reduction to remove background hiss and Volume Booster to normalize audio levels across an entire album, and features that traditional splitters simply don't offer.

Overall, AnyMP4 Video Converter Ultimate provides the most stable, modern, and feature-rich solution for splitting FLAC CUE files while enhancing the overall listening experience through cutting-edge AI technology.

1. Add FLAC CUE file

After installing AnyMP4 FLAC CUE splitter software, you can launch the program and open the main interface, then click "Add Files" button to add the FLAC CUE file to the program. Or you can drag and drop the FLAC CUE file into this software.

2. Select the output format

Click the drop-down arrow of "Convert All to" and choose "Audio" section to select one output format like MP3, M4A, MP2, WAV, and WMA and other.

If you would like, you can use the edit option to edit teh CUE file before splitting.

3. Split FLAC CUE tracks

This FLAC CUE splitter and converter software highly supports batch conversion, click "Convert All" button and all your FLAC files would be converted to your wanted audio format in a short time.

Part 3. How to Split FLAC CUE with Medieval Cue Splitter

Medieval Cue Splitter is a freeware that efficiently splits large FLAC CUEs into separate audio tracks based on CUE sheet information. Besides FLAC, it supports MP3, APE, OGG, WAV, WMA, and many other popular lossless or lossy audio formats without decoding/re-encoding any audio data. Before the popularity of modern media players and audio converters, it was very common to process single-file albums with CUE sheets. Medieval Cue Splitter provides a reliable and straightforward way to break these large files into individual manageable tracks for easy organization and listening.

Now, let's check how this FLAC CUE splitter works to split the CUE file.

Steps of Using Medieval Cue Splitter to Split FLAC Files

1. Firstly, you should download this CUE splitter from its official page to your Windows computer. Follow the onscreen instructions to install and run it.

Note: You should agree to be bound by the terms of the Medieval Freeware License. Otherwise, you cannot use it.

2. Click "File" > "Open CUE file…" from the top menu to open and select the CUE files that you want to split. This FLAC CUE splitter supports batch files split, and you are allowed to add more than one FLAC CUE files into this software.

3. When you're ready to split the large .flac file into individual tracks, click the "Split" button in the bottom right corner of the window.

Once completed, a small pop-up window will appear and click "OK" to complete the whole splitter. At last you will have each track on the album as an individual .flac file, and you could play the split FLAC files with the FLAC player directly.

Note: There are the limits you should know:

• MPC engine can cause a bit of jitter at the beginning/end of tracks.
• MD5 checksum is not calculated for generating FLAC files.
• There is a tag in FLAC CUE splitter.

Troubleshooting: how to fix common medieval cue splitter errors

Although Medieval CUE Splitter is a classic tool, many users encounter errors on Windows 10 and 11 because the software hasn't been updated in years. Here are the most common issues and how to fix them:

Problem 1: "External Exception E06D7363" or "File Not Found"

This is the most frequent error. It usually happens because the CUE file cannot correctly "locate" the corresponding FLAC file.

The Fix: Open the .cue file with Notepad. Look for the line that starts with FILE. Ensure the filename inside the quotation marks matches your FLAC file's name exactly (including the extension).

Example: FILE "album-audio.flac" WAVE

Problem 2: "Floating point division by zero" Error

This often occurs when the software tries to process a corrupted CUE file or one with non-standard time formatting.

The Fix: Check if the CUE file uses UTF-8 encoding. Medieval CUE Splitter works best with ANSI encoding. Open the CUE in Notepad, click "Save As," and change the encoding to ANSI before trying again.

Problem 3: Software Freezes During Splitting

On modern Windows systems, the software may lack the necessary permissions to write files to protected folders.

The Fix: Right-click the Medieval CUE Splitter icon and select "Run as Administrator." Additionally, try setting the Compatibility Mode to "Windows 7" in the file properties.

Part 4. How to Split FLAC by CUE Online (No Installation Required)

For users who only have a few small files or prefer not to install any software on their computer, using an online CUE splitter is a viable solution. Currently, Media.io and Aspose Audio Splitter are the most reliable web-based tools for this task.

Here, we will take the online tool, Aspose Audio Splitter, as an example to show you the steps.

1. Go to the Aspose Audio Splitter official webpage.

2. Click inside the file drop area to upload your FLAC file.

Note: In most online tools like Aspose, you may need to ensure your CUE information is either embedded or ready to be uploaded so the server knows where to "cut" the audio.

3. Select the output format (keep it as FLAC for lossless quality or choose MP3 for better compatibility). Choose the split mode based on the CUE sheet timestamps.

4. Click the SPLIT button. Once the processing is finished, click the DOWNLOAD link to get your split tracks in a ZIP archive.

Why choose Aspose?

• • Safety: Uploaded files are automatically deleted from their servers after 24 hours.
• • No cost: It is free to use for files within their size limits.

Limitations to consider:

• • Stability: Large FLAC albums (e.g., 24-bit/192kHz) can be several gigabytes, which often causes online browsers to time out or crash during the upload.
• • No batch editing: You cannot edit ID3 tags or album art for all tracks at once like you can in AnyMP4 Video Converter Ultimate.

Our recommendation:

Use an online tool for a quick, one-time task with small files. However, for a high-quality, stable, and unlimited splitting experience, a desktop FLAC CUE splitter is always the superior choice.

Conclusion

Choosing the best FLAC CUE splitter depends on your specific needs. If you have a small file and want a quick fix without installation, Aspose Online Splitter is a handy web-based choice. For Windows purists who prefer lightweight legacy freeware, Medieval CUE Splitter remains a classic option, despite its occasional bugs on newer systems.

However, for users who demand 100% lossless quality, high-speed batch processing, and modern features like AI noise reduction and macOS compatibility, AnyMP4 Video Converter Ultimate is the superior choice. It offers a seamless, error-free experience that modernizes your music library in seconds.

Ready to split your FLAC albums with zero quality loss? [Download AnyMP4 Video Converter Ultimate] today and experience the fastest AI-powered audio splitting!